NMBR
Neuromedin-B receptor
Also known as: BB1, BB1R, BRS1, NMBR_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P28336
- Gene
- NMBR
- Ensembl
- ENSG00000135577
- Chromosome
- 6
- Canonical length
- 390 aa
- Protein class
- G-protein coupled receptors, Plasma proteins, Predicted membrane proteins
- Subcellular location
- Plasma membrane,Cytosol
OverviewNCBI Gene
This gene encodes a 7-transmembrane G protein-coupled receptor that binds neuromedin B, which is a growth factor and mitogen for gastrointestinal epithelial tissue and for normal and neoplastic lung. This receptor may play a role in smooth muscle contraction, neuronal responses, and the regulation of cell growth. Antagonists of this receptor have a potential therapeutic use in inhibiting tumor cell growth. Polymorphisms in this gene may be associated with a susceptibility for schizophrenia. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Apr 2016]
Canonical amino-acid sequenceUniProt
390 residues, UniProt reviewed canonical sequence.
>P28336|NMBR
1 MPSKSLSNLS VTTGANESGS VPEGWERDFL PASDGTTTEL VIRCVIPSLY LLIITVGLLG
61 NIMLVKIFIT NSAMRSVPNI FISNLAAGDL LLLLTCVPVD ASRYFFDEWM FGKVGCKLIP
121 VIQLTSVGVS VFTLTALSAD RYRAIVNPMD MQTSGALLRT CVKAMGIWVV SVLLAVPEAV
181 FSEVARISSL DNSSFTACIP YPQTDELHPK IHSVLIFLVY FLIPLAIISI YYYHIAKTLI
241 KSAHNLPGEY NEHTKKQMET RKRLAKIVLV FVGCFIFCWF PNHILYMYRS FNYNEIDPSL
301 GHMIVTLVAR VLSFGNSCVN PFALYLLSES FRRHFNSQLC CGRKSYQERG TSYLLSSSAV
361 RMTSLKSNAK NMVTNSVLLN GHSMKQEMALLocalizationUniProt · AlphaFold · HPA
Whether an antibody against NMBR can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 7
- Mean surface accessibility (rSASA)
- 0.38
- Highest tissue expression
- 0.6 nTPM
Expression across tissuesHPA
Tissue
- testis: 0.6 nTPM
- basal ganglia: 0.5 nTPM
- fallopian tube: 0.4 nTPM
- hypothalamus: 0.4 nTPM
- amygdala: 0.2 nTPM
- cerebral cortex: 0.2 nTPM
Single-cell type
- respiratory ciliated cells: 24 nCPM
- late primary spermatocytes: 20 nCPM
- early primary spermatocytes: 16 nCPM
- ependymal cells: 11 nCPM
- adrenal medulla cells: 11 nCPM
- other brain neurons: 9.7 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- pons: 2 nTPM
- hypothalamus: 1.7 nTPM
- medulla oblongata: 1.5 nTPM
- spinal cord: 1.5 nTPM
- midbrain: 1.4 nTPM
- basal ganglia: 1.3 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.79
- gnomAD pLI
- 0
- gnomAD missense Z
- -0.8
- DepMap mean gene effect
- 0.11
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- antiviral innate immune response
- G protein-coupled receptor signaling pathway
- negative regulation of interleukin-6 production
- phospholipase C-activating G protein-coupled receptor signaling pathway
- positive regulation of interferon-alpha production
- positive regulation of osteoclast proliferation
- positive regulation of respiratory gaseous exchange
- sneeze reflex
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads NMBR as an antibody target. Whether an autoantibody or antibody against NMBR could matter depends on whether native NMBR is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
NMBR is annotated at the cell surface, where native NMBR is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label NMBR as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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