MRPL57
Large ribosomal subunit protein mL63
Also known as: MRP63, RT63_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9BQC6
- Gene
- MRPL57
- Ensembl
- ENSG00000173141
- Chromosome
- 13
- Canonical length
- 102 aa
- Protein class
- Predicted intracellular proteins, Ribosomal proteins
- Subcellular location
- Mitochondria
OverviewNCBI Gene
Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a protein which belongs to an undetermined ribosomal subunit and which seems to be specific to animal mitoribosomes. Pseudogenes corresponding to this gene are found on chromosomes 1p, 1q, 3p, 5q, 8q, 14q, and Y. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
102 residues, UniProt reviewed canonical sequence.
>Q9BQC6|MRPL57
1 MFLTALLWRG RIPGRQWIGK HRRPRFVSLR AKQNMIRRLE IEAENHYWLS MPYMTREQER
61 GHAAVRRREA FEAIKAAATS KFPPHRFIAD QLDHLNVTKK WSLocalizationUniProt · AlphaFold · HPA
Whether an antibody against MRPL57 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.57
- Highest tissue expression
- 38 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 38 nTPM
- kidney: 28 nTPM
- liver: 28 nTPM
- pituitary gland: 27 nTPM
- heart muscle: 27 nTPM
- adrenal gland: 26 nTPM
Single-cell type
- hepatocytes: 553 nCPM
- late spermatids: 434 nCPM
- esophageal suprabasal cells: 421 nCPM
- esophageal basal cells: 347 nCPM
- epididymal principal cells: 340 nCPM
- gastric progenitor cells: 326 nCPM
Immune cell
- plasmacytoid DC: 102 nTPM
- total PBMC: 72 nTPM
- classical monocyte: 70 nTPM
- T-reg: 70 nTPM
- naive CD4 T-cell: 70 nTPM
- myeloid DC: 64 nTPM
Brain region
- hypothalamus: 30 nTPM
- thalamus: 23 nTPM
- midbrain: 23 nTPM
- medulla oblongata: 22 nTPM
- pons: 22 nTPM
- cerebellum: 22 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.77
- gnomAD pLI
- 0.14
- DepMap mean gene effect
- -0.68
- DepMap dependency class
- common
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 5% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Large ribosomal subunit protein mL63
- Mitochondrial ribosome protein 63
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of MRPL57 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads MRPL57 as an antibody target. Whether an autoantibody or antibody against MRPL57 could matter depends on whether native MRPL57 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
MRPL57 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label MRPL57 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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