LMLN
Leishmanolysin-like peptidase
Also known as: Gp63, LMLN_HUMAN, LMNL1, Msp
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q96KR4
- Gene
- LMLN
- Ensembl
- ENSG00000185621
- Chromosome
- 3
- Canonical length
- 647 aa
- Protein class
- Enzymes, Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Focal adhesion sites,Cytosol
OverviewNCBI Gene
This gene encodes a zinc-metallopeptidase. The encoded protein may play a role in cell migration and invasion. Studies of a similar protein in Drosophila indicate a potential role in mitotic progression. Alternatively spliced transcript variants have been described. [provided by RefSeq, Feb 2009]
Canonical amino-acid sequenceUniProt
647 residues, UniProt reviewed canonical sequence.
>Q96KR4|LMLN
1 MAAEWGGGVG YSGSGPGRSR WRWSGSVWVR SVLLLLGGLR ASATSTPVSL GSSPPCRHHV
61 PSDTEVINKV HLKANHVVKR DVDEHLRIKT VYDKSVEELL PEKKNLVKNK LFPQAISYLE
121 KTFQVRRPAG TILLSRQCAT NQYLRKENDP HRYCTGECAA HTKCGPVIVP EEHLQQCRVY
181 RGGKWPHGAV GVPDQEGISD ADFVLYVGAL ATERCSHENI ISYAAYCQQE ANMDRPIAGY
241 ANLCPNMIST QPQEFVGMLS TVKHEVIHAL GFSAGLFAFY HDKDGNPLTS RFADGLPPFN
301 YSLGLYQWSD KVVRKVERLW DVRDNKIVRH TVYLLVTPRV VEEARKHFDC PVLEGMELEN
361 QGGVGTELNH WEKRLLENEA MTGSHTQNRV LSRITLALME DTGRQMLSPY CDTLRSNPLQ
421 LTCRQDQRAV AVCNLQKFPK PLPQEYQYFD ELSGIPAEDL PYYGGSVEIA DYCPFSQEFS
481 WHLSGEYQRS SDCRILENQP EIFKNYGAEK YGPHSVCLIQ KSAFVMEKCE RKLSYPDWGS
541 GCYQVSCSPQ GLKVWVQDTS YLCSRAGQVL PVSIQMNGWI HDGNLLCPSC WDFCELCPPE
601 TDPPATNLTR ALPLDLCSCS SSLVVTLWLL LGNLFPLLAG FLLCIWHLocalizationUniProt · AlphaFold · HPA
Whether an antibody against LMLN can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.32
- Highest tissue expression
- 11 nTPM
Expression across tissuesHPA
Tissue
- epididymis: 11 nTPM
- retina: 9.1 nTPM
- testis: 9 nTPM
- pituitary gland: 6.2 nTPM
- basal ganglia: 5.5 nTPM
- fallopian tube: 4.2 nTPM
Single-cell type
- ependymal cells: 131 nCPM
- respiratory ciliated cells: 97 nCPM
- choroid plexus epithelial cells: 76 nCPM
- thyrotrophs: 69 nCPM
- pituicytes/fscs: 69 nCPM
- sertoli cells: 67 nCPM
Immune cell
- naive CD8 T-cell: 0.5 nTPM
- intermediate monocyte: 0.4 nTPM
- naive CD4 T-cell: 0.4 nTPM
- MAIT T-cell: 0.3 nTPM
- memory B-cell: 0.3 nTPM
- memory CD8 T-cell: 0.3 nTPM
Brain region
- choroid plexus: 13 nTPM
- pons: 12 nTPM
- cerebral cortex: 12 nTPM
- thalamus: 11 nTPM
- medulla oblongata: 10 nTPM
- midbrain: 9.9 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.88
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.9
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 9% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads LMLN as an antibody target. Whether an autoantibody or antibody against LMLN could matter depends on whether native LMLN is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
LMLN is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label LMLN as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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