LHB
Lutropin subunit beta
Also known as: CGB4, hLHB, LSH-B, LSHB_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P01229
- Gene
- LHB
- Ensembl
- ENSG00000104826
- Chromosome
- 19
- Canonical length
- 141 aa
- Protein class
- Cancer-related genes, Disease related genes, Human disease related genes, Predicted secreted proteins
- Secretome location
- Secreted to blood
OverviewNCBI Gene
This gene is a member of the glycoprotein hormone beta chain family and encodes the beta subunit of luteinizing hormone (LH). Glycoprotein hormones are heterodimers consisting of a common alpha subunit and an unique beta subunit which confers biological specificity. LH is expressed in the pituitary gland and promotes spermatogenesis and ovulation by stimulating the testes and ovaries to synthesize steroids. The genes for the beta chains of chorionic gonadotropin and for luteinizing hormone are contiguous on chromosome 19q13.3. Mutations in this gene are associated with hypogonadism which is characterized by infertility and pseudohermaphroditism. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
141 residues, UniProt reviewed canonical sequence.
>P01229|LHB
1 MEMLQGLLLL LLLSMGGAWA SREPLRPWCH PINAILAVEK EGCPVCITVN TTICAGYCPT
61 MMRVLQAVLP PLPQVVCTYR DVRFESIRLP GCPRGVDPVV SFPVALSCRC GPCRRSTSDC
121 GGPKDHPLTC DHPQLSGLLF LLocalizationUniProt · AlphaFold · HPA
Whether an antibody against LHB can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Secreted
- Secreted
- Yes
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.46
- Highest tissue expression
- 4,053 nTPM
Expression across tissuesHPA
Tissue
- pituitary gland: 4,053 nTPM
- pancreas: 12 nTPM
- adrenal gland: 3.9 nTPM
- testis: 3.5 nTPM
- stomach: 3.2 nTPM
- skin: 2.5 nTPM
Single-cell type
- gonadotrophs: 2,250 nCPM
- pituitary stem cells: 35 nCPM
- somatotrophs: 32 nCPM
- syncytiotrophoblasts: 11 nCPM
- oocytes: 9.2 nCPM
- late spermatids: 7.6 nCPM
Immune cell
- memory CD4 T-cell: 0.2 nTPM
- T-reg: 0.2 nTPM
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
Brain region
- cerebellum: 1.9 nTPM
- white matter: 1.7 nTPM
- cerebral cortex: 1.6 nTPM
- medulla oblongata: 1.6 nTPM
- pons: 1.6 nTPM
- hypothalamus: 1.5 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about LHB.
Disease | AllUniProt
Conditions LHB is implicated in, by any mechanism.
- Hypogonadotropic hypogonadism 23 with or without anosmia (HH23) MIM:228300
Disease | GeneticClinVar
6 pathogenic / likely-pathogenic of 94 ClinVar records.
Conditions with pathogenic or likely-pathogenic variants.
- Isolated lutropin deficiency
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.76
- gnomAD pLI
- 0
- gnomAD missense Z
- -0.62
- DepMap mean gene effect
- 0.05
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cell-cell signaling
- G protein-coupled receptor signaling pathway
- hormone-mediated signaling pathway
- male gonad development
- progesterone biosynthetic process
- signal transduction
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads LHB as an antibody target. Whether an autoantibody or antibody against LHB could matter depends on whether native LHB is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
LHB is annotated as secreted, so native LHB circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.
Annotation status
The present source text does not explicitly label LHB as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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