LEAP2
Liver-expressed antimicrobial peptide 2
Also known as: LEAP-2, LEAP2_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q969E1
- Gene
- LEAP2
- Ensembl
- ENSG00000164406
- Chromosome
- 5
- Canonical length
- 77 aa
- Protein class
- Plasma proteins, Predicted secreted proteins
- Secretome location
- Secreted to blood
OverviewNCBI Gene
This gene encodes a cysteine-rich cationic antimicrobial peptide that is expressed predominantly in the liver. The mature peptide has activity against gram-positive bacteria and yeasts. [provided by RefSeq, Sep 2014]
Canonical amino-acid sequenceUniProt
77 residues, UniProt reviewed canonical sequence.
>Q969E1|LEAP2
1 MWHLKLCAVL MIFLLLLGQI DGSPIPEVSS AKRRPRRMTP FWRGVSLRPI GASCRDDSEC
61 ITRLCRKRRC SLSVAQELocalizationUniProt · AlphaFold · HPA
Whether an antibody against LEAP2 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Secreted
- Secreted
- Yes
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.53
- Highest tissue expression
- 496 nTPM
Expression across tissuesHPA
Tissue
- liver: 496 nTPM
- small intestine: 22 nTPM
- duodenum: 12 nTPM
- kidney: 11 nTPM
- urinary bladder: 7.4 nTPM
- gallbladder: 4.2 nTPM
Single-cell type
- hepatocytes: 1,982 nCPM
- enterocytes: 265 nCPM
- urothelial cells: 126 nCPM
- cholangiocytes: 73 nCPM
- parietal cells: 42 nCPM
- epididymal efferent duct absorptive cells: 39 nCPM
Immune cell
- neutrophil: 1.6 nTPM
- basophil: 1.2 nTPM
- memory B-cell: 1 nTPM
- naive CD4 T-cell: 1 nTPM
- NK-cell: 1 nTPM
- T-reg: 1 nTPM
Brain region
- cerebellum: 6 nTPM
- white matter: 4.8 nTPM
- cerebral cortex: 3.7 nTPM
- pons: 3.7 nTPM
- basal ganglia: 3.3 nTPM
- hippocampal formation: 3.3 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.87
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.01
- DepMap mean gene effect
- 0.07
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Liver-expressed antimicrobial peptide 2
- Liver-expressed antimicrobial peptide 2 precursor (LEAP-2)
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads LEAP2 as an antibody target. Whether an autoantibody or antibody against LEAP2 could matter depends on whether native LEAP2 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
LEAP2 is annotated as secreted, so native LEAP2 circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.
Annotation status
The present source text does not explicitly label LEAP2 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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