KIAA0319
Dyslexia-associated protein KIAA0319
Also known as: K0319_HUMAN, NMIG
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q5VV43
- Gene
- KIAA0319
- Ensembl
- ENSG00000137261
- Chromosome
- 6
- Canonical length
- 1072 aa
- Protein class
- Disease related genes, Human disease related genes, Predicted membrane proteins, Predicted secreted proteins
- Subcellular location
- Vesicles
- Secretome location
- Secreted in brain
- Quaternary structure
- Homodimer
OverviewNCBI Gene
This gene encodes a transmembrane protein that contains a large extracellular domain with multiple polycystic kidney disease (PKD) domains. The encoded protein may play a role in the development of the cerebral cortex by regulating neuronal migration and cell adhesion. Single nucleotide polymorphisms in this gene are associated with dyslexia. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2011]
Canonical amino-acid sequenceUniProt
1072 residues, UniProt reviewed canonical sequence.
>Q5VV43|KIAA0319
1 MAPPTGVLSS LLLLVTIAGC ARKQCSEGRT YSNAVISPNL ETTRIMRVSH TFPVVDCTAA
61 CCDLSSCDLA WWFEGRCYLV SCPHKENCEP KKMGPIRSYL TFVLRPVQRP AQLLDYGDMM
121 LNRGSPSGIW GDSPEDIRKD LTFLGKDWGL EEMSEYSDDY RELEKDLLQP SGKQEPRGSA
181 EYTDWGLLPG SEGAFNSSVG DSPAVPAETQ QDPELHYLNE SASTPAPKLP ERSVLLPLPT
241 TPSSGEVLEK EKASQLQEQS SNSSGKEVLM PSHSLPPASL ELSSVTVEKS PVLTVTPGST
301 EHSIPTPPTS AAPSESTPSE LPISPTTAPR TVKELTVSAG DNLIITLPDN EVELKAFVAP
361 APPVETTYNY EWNLISHPTD YQGEIKQGHK QTLNLSQLSV GLYVFKVTVS SENAFGEGFV
421 NVTVKPARRV NLPPVAVVSP QLQELTLPLT SALIDGSQST DDTEIVSYHW EEINGPFIEE
481 KTSVDSPVLR LSNLDPGNYS FRLTVTDSDG ATNSTTAALI VNNAVDYPPV ANAGPNHTIT
541 LPQNSITLNG NQSSDDHQIV LYEWSLGPGS EGKHVVMQGV QTPYLHLSAM QEGDYTFQLK
601 VTDSSRQQST AVVTVIVQPE NNRPPVAVAG PDKELIFPVE SATLDGSSSS DDHGIVFYHW
661 EHVRGPSAVE MENIDKAIAT VTGLQVGTYH FRLTVKDQQG LSSTSTLTVA VKKENNSPPR
721 ARAGGRHVLV LPNNSITLDG SRSTDDQRIV SYLWIRDGQS PAAGDVIDGS DHSVALQLTN
781 LVEGVYTFHL RVTDSQGASD TDTATVEVQP DPRKSGLVEL TLQVGVGQLT EQRKDTLVRQ
841 LAVLLNVLDS DIKVQKIRAH SDLSTVIVFY VQSRPPFKVL KAAEVARNLH MRLSKEKADF
901 LLFKVLRVDT AGCLLKCSGH GHCDPLTKRC ICSHLWMENL IQRYIWDGES NCEWSIFYVT
961 VLAFTLIVLT GGFTWLCICC CKRQKRTKIR KKTKYTILDN MDEQERMELR PKYGIKHRST
1021 EHNSSLMVSE SEFDSDQDTI FSREKMERGN PKVSMNGSIR NGASFSYCSK DRLocalizationUniProt · AlphaFold · HPA
Whether an antibody against KIAA0319 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.44
- Highest tissue expression
- 11 nTPM
Expression across tissuesHPA
Tissue
- cerebral cortex: 11 nTPM
- basal ganglia: 10 nTPM
- cerebellum: 9.6 nTPM
- amygdala: 8.1 nTPM
- hypothalamus: 7.3 nTPM
- hippocampal formation: 6.9 nTPM
Single-cell type
- ependymal cells: 277 nCPM
- respiratory ciliated cells: 240 nCPM
- astrocytes: 191 nCPM
- thyrotrophs: 184 nCPM
- brain excitatory neurons: 158 nCPM
- other brain neurons: 154 nCPM
Immune cell
- neutrophil: 1.6 nTPM
- memory B-cell: 0.4 nTPM
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
Brain region
- thalamus: 33 nTPM
- basal ganglia: 29 nTPM
- cerebral cortex: 28 nTPM
- amygdala: 26 nTPM
- hippocampal formation: 25 nTPM
- pons: 23 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about KIAA0319.
Disease | AllUniProt
Conditions KIAA0319 is implicated in, by any mechanism.
- Dyslexia 2 (DYX2) MIM:600202
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.99
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.46
- DepMap mean gene effect
- 0.02
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- central nervous system neuron development
- multicellular organismal response to stress
- negative regulation of axon extension
- negative regulation of axon extension involved in regeneration
- negative regulation of dendrite development
- neuron migration
- positive regulation of SMAD protein signal transduction
- sensory perception of sound
- thalamus development
- vocal learning
Cellular components
Protein domainsUniProt · Pfam · InterPro
- PKD domain
- Fibronectin type III
- Seven cysteines, N-terminal
- Immunoglobulin-like fold
- MANSC domain
- PKD/Chitinase domain
- Dyslexia-associated protein KIAA0319-like
- PKD domain superfamily
- KIAA0319-like, C-terminal domain
- K319L-like, PKD domain
- Dyslexia-associated protein KIAA0319 N-terminal domain
- KIAA0319 C-terminal domain
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of KIAA0319 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads KIAA0319 as an antibody target. Whether an autoantibody or antibody against KIAA0319 could matter depends on whether native KIAA0319 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
KIAA0319 is annotated at the cell surface, where native KIAA0319 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label KIAA0319 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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