KCNH7
Voltage-gated inwardly rectifying potassium channel KCNH7
Also known as: erg3, HERG3, KCNH7_HUMAN, Kv11.3
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9NS40
- Gene
- KCNH7
- Ensembl
- ENSG00000184611
- Chromosome
- 2
- Canonical length
- 1196 aa
- Protein class
- FDA approved drug targets, Predicted membrane proteins, Voltage-gated ion channels
OverviewNCBI Gene
Voltage-gated potassium (Kv) channels represent the most complex class of voltage-gated ion channels from both functional and structural standpoints. Their diverse functions include regulating neurotransmitter release, heart rate, insulin secretion, neuronal excitability, epithelial electrolyte transport, smooth muscle contraction, and cell volume. This gene encodes a member of the potassium channel, voltage-gated, subfamily H. This member is a pore-forming (alpha) subunit. There are at least two alternatively spliced transcript variants derived from this gene and encoding distinct isoforms. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
1196 residues, UniProt reviewed canonical sequence.
>Q9NS40|KCNH7
1 MPVRRGHVAP QNTFLGTIIR KFEGQNKKFI IANARVQNCA IIYCNDGFCE MTGFSRPDVM
61 QKPCTCDFLH GPETKRHDIA QIAQALLGSE ERKVEVTYYH KNGSTFICNT HIIPVKNQEG
121 VAMMFIINFE YVTDNENAAT PERVNPILPI KTVNRKFFGF KFPGLRVLTY RKQSLPQEDP
181 DVVVIDSSKH SDDSVAMKHF KSPTKESCSP SEADDTKALI QPSKCSPLVN ISGPLDHSSP
241 KRQWDRLYPD MLQSSSQLSH SRSRESLCSI RRASSVHDIE GFGVHPKNIF RDRHASEDNG
301 RNVKGPFNHI KSSLLGSTSD SNLNKYSTIN KIPQLTLNFS EVKTEKKNSS PPSSDKTIIA
361 PKVKDRTHNV TEKVTQVLSL GADVLPEYKL QTPRINKFTI LHYSPFKAVW DWLILLLVIY
421 TAIFTPYSAA FLLNDREEQK RRECGYSCSP LNVVDLIVDI MFIIDILINF RTTYVNQNEE
481 VVSDPAKIAI HYFKGWFLID MVAAIPFDLL IFGSGSDETT TLIGLLKTAR LLRLVRVARK
541 LDRYSEYGAA VLMLLMCIFA LIAHWLACIW YAIGNVERPY LTDKIGWLDS LGQQIGKRYN
601 DSDSSSGPSI KDKYVTALYF TFSSLTSVGF GNVSPNTNSE KIFSICVMLI GSLMYASIFG
661 NVSAIIQRLY SGTARYHMQM LRVKEFIRFH QIPNPLRQRL EEYFQHAWTY TNGIDMNMVL
721 KGFPECLQAD ICLHLNQTLL QNCKAFRGAS KGCLRALAMK FKTTHAPPGD TLVHCGDVLT
781 ALYFLSRGSI EILKDDIVVA ILGKNDIFGE MVHLYAKPGK SNADVRALTY CDLHKIQRED
841 LLEVLDMYPE FSDHFLTNLE LTFNLRHESA KADLLRSQSM NDSEGDNCKL RRRKLSFESE
901 GEKENSTNDP EDSADTIRHY QSSKRHFEEK KSRSSSFISS IDDEQKPLFS GIVDSSPGIG
961 KASGLDFEET VPTSGRMHID KRSHSCKDIT DMRSWERENA HPQPEDSSPS ALQRAAWGIS
1021 ETESDLTYGE VEQRLDLLQE QLNRLESQMT TDIQTILQLL QKQTTVVPPA YSMVTAGSEY
1081 QRPIIQLMRT SQPEASIKTD RSFSPSSQCP EFLDLEKSKL KSKESLSSGV HLNTASEDNL
1141 TSLLKQDSDL SLELHLRQRK TYVHPIRHPS LPDSSLSTVG IVGLHRHVSD PGLPGKLocalizationUniProt · AlphaFold · HPA
Whether an antibody against KCNH7 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 6
- Mean surface accessibility (rSASA)
- 0
- Highest tissue expression
- 2.4 nTPM
Expression across tissuesHPA
Tissue
- cerebral cortex: 2.4 nTPM
- retina: 1.4 nTPM
- liver: 0.5 nTPM
- stomach: 0.5 nTPM
- cerebellum: 0.4 nTPM
- testis: 0.3 nTPM
Single-cell type
- retinal horizontal cells: 970 nCPM
- corticotrophs: 928 nCPM
- brain excitatory neurons: 529 nCPM
- other brain neurons: 518 nCPM
- retinal bipolar cells: 457 nCPM
- late spermatids: 359 nCPM
Immune cell
- neutrophil: 0.5 nTPM
- eosinophil: 0.3 nTPM
- basophil: 0.1 nTPM
- classical monocyte: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
Brain region
- cerebral cortex: 34 nTPM
- basal ganglia: 20 nTPM
- cerebellum: 19 nTPM
- white matter: 17 nTPM
- hypothalamus: 12 nTPM
- medulla oblongata: 11 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.37
- gnomAD pLI
- 0.28
- gnomAD missense Z
- 3.04
- DepMap mean gene effect
- -0.01
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 2% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
- PAS domain
- Cyclic nucleotide-binding domain
- Potassium channel, voltage-dependent, EAG/ELK/ERG-like
- Potassium channel, voltage-dependent, ERG
- Ion transport domain
- RmlC-like jelly roll fold
- Cyclic nucleotide-binding domain superfamily
- PAS domain superfamily
- Potassium channel, voltage-dependent, EAG/ELK/ERG-like, animal-type
- Cyclic nucleotide-binding domain
- Ion transport protein
- PAS domain
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads KCNH7 as an antibody target. Whether an autoantibody or antibody against KCNH7 could matter depends on whether native KCNH7 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
KCNH7 is annotated at the cell surface, where native KCNH7 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label KCNH7 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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