IL20RA
Interleukin-20 receptor subunit alpha
Also known as: I20RA_HUMAN, IL-20R1, ZCYTOR7
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q9UHF4
- Gene
- IL20RA
- Ensembl
- ENSG00000016402
- Chromosome
- 6
- Canonical length
- 553 aa
- Protein class
- Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Cytosol
OverviewNCBI Gene
This gene encodes a member of the type II cytokine receptor family. The encoded protein is a subunit of the receptor for interleukin 20, a cytokine that may be involved in epidermal function. The interleukin 20 receptor is a heterodimeric complex consisting of the encoded protein and interleukin 20 receptor beta. This gene and interleukin 20 receptor beta are highly expressed in skin, and are upregulated in psoriasis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]
Canonical amino-acid sequenceUniProt
553 residues, UniProt reviewed canonical sequence.
>Q9UHF4|IL20RA
1 MRAPGRPALR PLPLPPLLLL LLAAPWGRAV PCVSGGLPKP ANITFLSINM KNVLQWTPPE
61 GLQGVKVTYT VQYFIYGQKK WLNKSECRNI NRTYCDLSAE TSDYEHQYYA KVKAIWGTKC
121 SKWAESGRFY PFLETQIGPP EVALTTDEKS ISVVLTAPEK WKRNPEDLPV SMQQIYSNLK
181 YNVSVLNTKS NRTWSQCVTN HTLVLTWLEP NTLYCVHVES FVPGPPRRAQ PSEKQCARTL
241 KDQSSEFKAK IIFWYVLPVS ITVFLFSVMG YSIYRYIHVG KEKHPANLIL IYGNEFDKRF
301 FVPAEKIVIN FITLNISDDS KISHQDMSLL GKSSDVSSLN DPQPSGNLRP PQEEEEVKHL
361 GYASHLMEIF CDSEENTEGT SLTQQESLSR TIPPDKTVIE YEYDVRTTDI CAGPEEQELS
421 LQEEVSTQGT LLESQAALAV LGPQTLQYSY TPQLQDLDPL AQEHTDSEEG PEEEPSTTLV
481 DWDPQTGRLC IPSLSSFDQD SEGCEPSEGD GLGEEGLLSR LYEEPAPDRP PGENETYLMQ
541 FMEEWGLYVQ MENLocalizationUniProt · AlphaFold · HPA
Whether an antibody against IL20RA can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.52
- Highest tissue expression
- 36 nTPM
Expression across tissuesHPA
Tissue
- skin: 36 nTPM
- breast: 25 nTPM
- fallopian tube: 16 nTPM
- cervix: 16 nTPM
- vagina: 11 nTPM
- salivary gland: 9.1 nTPM
Single-cell type
- endometrial ciliated cells: 134 nCPM
- respiratory ciliated cells: 112 nCPM
- fallopian tube ciliated cells: 107 nCPM
- endometrial luminal cells: 92 nCPM
- alveolar cells type 2: 90 nCPM
- neuroendocrine cells: 87 nCPM
Immune cell
- memory CD4 T-cell: 0.1 nTPM
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
Brain region
- choroid plexus: 7.1 nTPM
- midbrain: 6.9 nTPM
- spinal cord: 6.2 nTPM
- thalamus: 6 nTPM
- medulla oblongata: 5.6 nTPM
- cerebellum: 5.1 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 0.64
- gnomAD pLI
- 0.03
- gnomAD missense Z
- 0.71
- DepMap mean gene effect
- 0.05
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cytokine-mediated signaling pathway
- positive regulation of intrinsic apoptotic signaling pathway
- regulation of bone resorption
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads IL20RA as an antibody target. Whether an autoantibody or antibody against IL20RA could matter depends on whether native IL20RA is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
IL20RA is annotated at the cell surface, where native IL20RA is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label IL20RA as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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