IL17F
Interleukin-17F
Also known as: IL-17F, IL17F_HUMAN, ML-1, ML1
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- Q96PD4
- Gene
- IL17F
- Ensembl
- ENSG00000112116
- Chromosome
- 6
- Canonical length
- 163 aa
- Protein class
- Disease related genes, FDA approved drug targets, Human disease related genes, Predicted secreted proteins
- Secretome location
- Secreted to blood
- Quaternary structure
- Homodimer
OverviewNCBI Gene
The protein encoded by this gene is a cytokine that shares sequence similarity with IL17. This cytokine is expressed by activated T cells, and has been shown to stimulate the production of several other cytokines, including IL6, IL8, and CSF2/GM_CSF. This cytokine is also found to inhibit the angiogenesis of endothelial cells and induce endothelial cells to produce IL2, TGFB1/TGFB, and monocyte chemoattractant protein-1. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
163 residues, UniProt reviewed canonical sequence.
>Q96PD4|IL17F
1 MTVKTLHGPA MVKYLLLSIL GLAFLSEAAA RKIPKVGHTF FQKPESCPPV PGGSMKLDIG
61 IINENQRVSM SRNIESRSTS PWNYTVTWDP NRYPSEVVQA QCRNLGCINA QGKEDISMNS
121 VPIQQETLVV RRKHQGCSVS FQLEKVLVTV GCTCVTPVIH HVQLocalizationUniProt · AlphaFold · HPA
Whether an antibody against IL17F can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Secreted
- Secreted
- Yes
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.49
- Highest tissue expression
- 2 nTPM
Expression across tissuesHPA
Tissue
- tonsil: 2 nTPM
- urinary bladder: 0.8 nTPM
- appendix: 0.5 nTPM
- esophagus: 0.3 nTPM
- thymus: 0.2 nTPM
- cervix: 0.1 nTPM
Single-cell type
- t-cells: 8.3 nCPM
- innate lymphoid cells: 4.1 nCPM
- foveolar cells: 1.2 nCPM
- early spermatids: 0.4 nCPM
- early primary spermatocytes: 0.2 nCPM
- migrating cytotrophoblasts: 0.2 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- hippocampal formation: 0.1 nTPM
- medulla oblongata: 0.1 nTPM
- amygdala: 0 nTPM
- basal ganglia: 0 nTPM
- cerebellum: 0 nTPM
- cerebral cortex: 0 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about IL17F.
Disease | AllUniProt
Conditions IL17F is implicated in, by any mechanism.
- Candidiasis, familial, 6 (CANDF6) MIM:613956
Disease | AutoantibodyPubMed
Conditions in which antibodies against IL17F are reported. Each links to that disease's full target list.
Showing 1 of 2 — disease pages carrying at least 10 antigens.
ReferencesPubMed · IEDB
Publications for IL17F from three distinct lines of evidence, kept separate because they answer different questions: whether antibodies are directed at the protein, whether a B-cell epitope has been mapped on it, and whether a T-cell epitope has. Each is labelled with its source.
Reference: AutoantibodyPubMed
6 publications
- Chronic mucocutaneous candidiasis in APECED or thymoma patients correlates with autoimmunity to Th17-associated cytokines.
2010 · J Exp Med · RCR 11.4 · 511 citations - Two novel gain-of-function mutations of STAT1 responsible for chronic mucocutaneous candidiasis disease: impaired production of IL-17A and IL-22, and the presence of anti-IL-17F autoantibody.
2014 · J Immunol · RCR 1.5 · 52 citations - Autoantibodies to IL-17A may be correlated with the severity of mucocutaneous candidiasis in APECED patients.
2014 · J Clin Immunol · RCR 1 · 33 citations - Measuring autoantibodies against IL-17F and IL-22 in autoimmune polyendocrine syndrome type I by radioligand binding assay using fusion proteins.
2011 · Scand J Immunol · RCR 0.4 · 18 citations - Neutralizing natural anti-IL-17F autoantibodies protect Autoimmune Polyendocrine Syndrome Type 1 (APS-1) patients from asthma.
2020 · Clin Immunol · RCR 0.1 · 4 citations
Show 1 more
- Elevated autoantibodies against interleukin-17F correlate with disease activity in patients with early rheumatoid arthritis.
2016 · Int J Rheum Dis · RCR 0.1 · 2 citations
Sources: PubMed — antigen-level antibody evidence from a custom retrieval. Records matching a controlled set of autoantibody terms (the MeSH descriptors Autoantibodies and Autoantigens, with title and abstract term variants) were obtained through NCBI E-utilities, and their titles and abstracts parsed for constructions that direct an antibody at a named protein rather than for co-occurrence. Captured names were resolved against UniProt nomenclature and each antigen adjudicated individually against the source text. Bibliographic records from PubMed and MeSH, U.S. National Library of Medicine; citation metrics from NIH iCite (Hutchins et al., PLoS Biology 2016). Titles link to PubMed; abstracts are not reproduced here. The NLM does not endorse this analysis.
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.18
- gnomAD pLI
- 0.04
- gnomAD missense Z
- -0.16
- DepMap mean gene effect
- -0.03
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- adaptive immune response
- cartilage development
- defense response to Gram-negative bacterium
- defense response to Gram-positive bacterium
- inflammatory response
- innate immune response
- interleukin-17-mediated signaling pathway
- negative regulation of angiogenesis
- positive regulation of antimicrobial peptide production
- positive regulation of chemokine (C-X-C motif) ligand 1 production
- positive regulation of cytokine production
- positive regulation of cytokine production involved in inflammatory response
- positive regulation of interleukin-6 production
- positive regulation of lymphotoxin A production
- positive regulation of transcription by RNA polymerase II
- regulation of interleukin-2 production
- regulation of interleukin-6 production
- regulation of interleukin-8 production
- regulation of transforming growth factor beta receptor signaling pathway
- regulation of granulocyte macrophage colony-stimulating factor production
Molecular functions
- cytokine activity
- cytokine binding
- cytokine receptor binding
- protein heterodimerization activity
- protein homodimerization activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads IL17F as an antibody target. Whether an autoantibody or antibody against IL17F could matter depends on whether native IL17F is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
IL17F is annotated as secreted, so native IL17F circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.
Annotation status
The present source text does not explicitly label IL17F as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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