DEFB130B
Beta-defensin 130B
Also known as: D130B_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P0DP73
- Gene
- DEFB130B
- Ensembl
- ENSG00000233050
- Chromosome
- 8
- Canonical length
- 79 aa
- Protein class
- Predicted secreted proteins
- Secretome location
- Secreted in male reproductive system
OverviewNCBI Gene
Defensins are cysteine-rich cationic polypeptides that are important in the immunologic response to invading microorganisms. The antimicrobial protein encoded by this gene is secreted and is a member of the beta defensin protein family. Beta defensin genes are found in several clusters throughout the genome, with this gene mapping to a cluster at 8p23. [provided by RefSeq, Nov 2014]
Canonical amino-acid sequenceUniProt
79 residues, UniProt reviewed canonical sequence.
>P0DP73|DEFB130B
1 MKLHSLISVL LLFVTLIPKG KTGVIPGQKQ CIALKGVCRD KLCSTLDDTI GICNEGKKCC
61 RRWWILEPYP TPVPKGKSPLocalizationUniProt · AlphaFold · HPA
Whether an antibody against DEFB130B can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Secreted
- Secreted
- Yes
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.46
- Highest tissue expression
- 2.4 nTPM
Expression across tissuesHPA
Tissue
- epididymis: 2.4 nTPM
- adipose tissue: 0 nTPM
- adrenal gland: 0 nTPM
- amygdala: 0 nTPM
- appendix: 0 nTPM
- basal ganglia: 0 nTPM
Single-cell type
- adipocytes: 0 nCPM
- adrenal cortex cells: 0 nCPM
- adrenal medulla cells: 0 nCPM
- alveolar cells type 1: 0 nCPM
- alveolar cells type 2: 0 nCPM
- b-cells: 0 nCPM
Immune cell
- basophil: 0 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- gdT-cell: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- cerebellum: 1.1 nTPM
- medulla oblongata: 1.1 nTPM
- white matter: 1.1 nTPM
- cerebral cortex: 1 nTPM
- pons: 0.8 nTPM
- amygdala: 0.7 nTPM
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads DEFB130B as an antibody target. Whether an autoantibody or antibody against DEFB130B could matter depends on whether native DEFB130B is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
DEFB130B is annotated as secreted, so native DEFB130B circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.
Annotation status
The present source text does not explicitly label DEFB130B as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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