CYP3A5
Cytochrome P450 3A5
Also known as: CP35, CP3A5_HUMAN, P450PCN3, PCN3
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P20815
- Gene
- CYP3A5
- Ensembl
- ENSG00000106258
- Chromosome
- 7
- Canonical length
- 502 aa
- Protein class
- Cancer-related genes, Enzymes, Metabolic proteins, Predicted intracellular proteins, Predicted membrane proteins
- Subcellular location
- Vesicles,Cytosol
OverviewNCBI Gene
This gene encodes a member of the cytochrome P450 superfamily of enzymes. The cytochrome P450 proteins are monooxygenases which catalyze many reactions involved in drug metabolism and synthesis of cholesterol, steroids and other lipids. The encoded protein metabolizes drugs as well as the steroid hormones testosterone and progesterone. This gene is part of a cluster of cytochrome P450 genes on chromosome 7q21.1. Two pseudogenes of this gene have been identified within this cluster on chromosome 7. Expression of this gene is widely variable among populations, and a single nucleotide polymorphism that affects transcript splicing has been associated with susceptibility to hypertensions. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2014]
Canonical amino-acid sequenceUniProt
502 residues, UniProt reviewed canonical sequence.
>P20815|CYP3A5
1 MDLIPNLAVE TWLLLAVSLV LLYLYGTRTH GLFKRLGIPG PTPLPLLGNV LSYRQGLWKF
61 DTECYKKYGK MWGTYEGQLP VLAITDPDVI RTVLVKECYS VFTNRRSLGP VGFMKSAISL
121 AEDEEWKRIR SLLSPTFTSG KLKEMFPIIA QYGDVLVRNL RREAEKGKPV TLKDIFGAYS
181 MDVITGTSFG VNIDSLNNPQ DPFVESTKKF LKFGFLDPLF LSIILFPFLT PVFEALNVSL
241 FPKDTINFLS KSVNRMKKSR LNDKQKHRLD FLQLMIDSQN SKETESHKAL SDLELAAQSI
301 IFIFAGYETT SSVLSFTLYE LATHPDVQQK LQKEIDAVLP NKAPPTYDAV VQMEYLDMVV
361 NETLRLFPVA IRLERTCKKD VEINGVFIPK GSMVVIPTYA LHHDPKYWTE PEEFRPERFS
421 KKKDSIDPYI YTPFGTGPRN CIGMRFALMN MKLALIRVLQ NFSFKPCKET QIPLKLDTQG
481 LLQPEKPIVL KVDSRDGTLS GELocalizationUniProt · AlphaFold · HPA
Whether an antibody against CYP3A5 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Other membrane
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.24
- Highest tissue expression
- 319 nTPM
Expression across tissuesHPA
Tissue
- liver: 319 nTPM
- small intestine: 167 nTPM
- duodenum: 120 nTPM
- stomach: 82 nTPM
- pancreas: 49 nTPM
- gallbladder: 31 nTPM
Single-cell type
- enterocytes: 1,916 nCPM
- foveolar cells: 1,067 nCPM
- hepatocytes: 1,064 nCPM
- urothelial cells: 675 nCPM
- cholangiocytes: 647 nCPM
- colonocytes: 614 nCPM
Immune cell
- MAIT T-cell: 0.9 nTPM
- memory CD4 T-cell: 0.6 nTPM
- memory CD8 T-cell: 0.5 nTPM
- naive CD8 T-cell: 0.5 nTPM
- neutrophil: 0.5 nTPM
- T-reg: 0.5 nTPM
Brain region
- cerebral cortex: 6.3 nTPM
- cerebellum: 6.2 nTPM
- white matter: 5.6 nTPM
- medulla oblongata: 5.5 nTPM
- pons: 5.5 nTPM
- choroid plexus: 5.4 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.39
- gnomAD pLI
- 0
- gnomAD missense Z
- 1.17
- DepMap mean gene effect
- -0.03
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- aflatoxin metabolic process
- alkaloid catabolic process
- estrogen metabolic process
- lipid hydroxylation
- oxidative demethylation
- retinoic acid metabolic process
- retinol metabolic process
- steroid metabolic process
- xenobiotic catabolic process
- xenobiotic metabolic process
Molecular functions
- estrogen 16-alpha-hydroxylase activity
- estrogen 2-hydroxylase activity
- heme binding
- iron ion binding
- monooxygenase activity
- oxidoreductase activity
- oxygen binding
- retinoic acid 4-hydroxylase activity
- testosterone 6-beta-hydroxylase activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CYP3A5 as an antibody target. Whether an autoantibody or antibody against CYP3A5 could matter depends on whether native CYP3A5 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CYP3A5 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label CYP3A5 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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