CPB1
Carboxypeptidase B
Also known as: CBPB1_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P15086
- Gene
- CPB1
- Ensembl
- ENSG00000153002
- Chromosome
- 3
- Canonical length
- 417 aa
- Protein class
- Enzymes, Plasma proteins, Predicted secreted proteins
- Subcellular location
- Endoplasmic reticulum
- Secretome location
- Secreted to digestive system
OverviewNCBI Gene
Three different procarboxypeptidases A and two different procarboxypeptidases B have been isolated. The B1 and B2 forms differ from each other mainly in isoelectric point. Carboxypeptidase B1 is a highly tissue-specific protein and is a useful serum marker for acute pancreatitis and dysfunction of pancreatic transplants. It is not elevated in pancreatic carcinoma. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
417 residues, UniProt reviewed canonical sequence.
>P15086|CPB1
1 MLALLVLVTV ALASAHHGGE HFEGEKVFRV NVEDENHINI IRELASTTQI DFWKPDSVTQ
61 IKPHSTVDFR VKAEDTVTVE NVLKQNELQY KVLISNLRNV VEAQFDSRVR ATGHSYEKYN
121 KWETIEAWTQ QVATENPALI SRSVIGTTFE GRAIYLLKVG KAGQNKPAIF MDCGFHAREW
181 ISPAFCQWFV REAVRTYGRE IQVTELLDKL DFYVLPVLNI DGYIYTWTKS RFWRKTRSTH
241 TGSSCIGTDP NRNFDAGWCE IGASRNPCDE TYCGPAAESE KETKALADFI RNKLSSIKAY
301 LTIHSYSQMM IYPYSYAYKL GENNAELNAL AKATVKELAS LHGTKYTYGP GATTIYPAAG
361 GSDDWAYDQG IRYSFTFELR DTGRYGFLLP ESQIRATCEE TFLAIKYVAS YVLEHLYLocalizationUniProt · AlphaFold · HPA
Whether an antibody against CPB1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Secreted
- Secreted
- Yes
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.23
- Highest tissue expression
- 213,987 nTPM
Expression across tissuesHPA
Tissue
- pancreas: 213,987 nTPM
- adrenal gland: 79 nTPM
- breast: 74 nTPM
- ovary: 46 nTPM
- heart muscle: 38 nTPM
- salivary gland: 34 nTPM
Single-cell type
- pancreatic acinar cells: 35,500 nCPM
- mesothelial cells: 347 nCPM
- megakaryocyte-erythroid progenitors: 228 nCPM
- pancreatic duct cells: 159 nCPM
- decidual stromal cells: 101 nCPM
- erythrocyte progenitors: 78 nCPM
Immune cell
- basophil: 4 nTPM
- neutrophil: 1.8 nTPM
- naive CD8 T-cell: 1.4 nTPM
- NK-cell: 1.4 nTPM
- gdT-cell: 1.3 nTPM
- memory CD8 T-cell: 1.1 nTPM
Brain region
- white matter: 6.7 nTPM
- basal ganglia: 3.5 nTPM
- cerebral cortex: 3.3 nTPM
- midbrain: 2.7 nTPM
- thalamus: 2.5 nTPM
- pons: 2.4 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about CPB1.
Disease | ImmuneIEDB
Conditions an epitope on CPB1 was assayed in.
- type 1 diabetes mellitus T cell
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.63
- gnomAD pLI
- 0
- gnomAD missense Z
- 0.34
- DepMap mean gene effect
- 0.03
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 2% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
Molecular functions
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CPB1 as an antibody target. Whether an autoantibody or antibody against CPB1 could matter depends on whether native CPB1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CPB1 is annotated as secreted, so native CPB1 circulates and is directly accessible to antibodies. Secreted and cell-surface proteins are the autoantibody targets most likely to act like drugs, blocking or depleting the native protein.
Annotation status
The present source text does not explicitly label CPB1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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