COX7C
Cytochrome c oxidase subunit 7C, mitochondrial
Also known as: COX7C_HUMAN
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P15954
- Gene
- COX7C
- Ensembl
- ENSG00000127184
- Chromosome
- 5
- Canonical length
- 63 aa
- Protein class
- Metabolic proteins, Predicted membrane proteins, Transporters
OverviewNCBI Gene
Cytochrome c oxidase (COX), the terminal component of the mitochondrial respiratory chain, catalyzes the electron transfer from reduced cytochrome c to oxygen. This component is a heteromeric complex consisting of 3 catalytic subunits encoded by mitochondrial genes and multiple structural subunits encoded by nuclear genes. The mitochondrially-encoded subunits function in electron transfer, and the nuclear-encoded subunits may function in the regulation and assembly of the complex. This nuclear gene encodes subunit VIIc, which shares 87% and 85% amino acid sequence identity with mouse and bovine COX VIIc, respectively, and is found in all tissues. A pseudogene COX7CP1 has been found on chromosome 13. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
63 residues, UniProt reviewed canonical sequence.
>P15954|COX7C
1 MLGQSIRRFT TSVVRRSHYE EGPGKNLPFS VENKWSLLAK MCLYFGSAFA TPFLVVRHQL
61 LKTLocalizationUniProt · AlphaFold · HPA
Whether an antibody against COX7C can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Other membrane
- Secreted
- No
- Transmembrane segments
- 1
- Mean surface accessibility (rSASA)
- 0.51
- Highest tissue expression
- 2,234 nTPM
Expression across tissuesHPA
Tissue
- skeletal muscle: 2,234 nTPM
- heart muscle: 1,588 nTPM
- tongue: 1,492 nTPM
- choroid plexus: 937 nTPM
- kidney: 824 nTPM
- parathyroid gland: 732 nTPM
Single-cell type
- parietal cells: 7,697 nCPM
- hepatocytes: 2,969 nCPM
- enterocytes: 2,821 nCPM
- esophageal suprabasal cells: 2,570 nCPM
- enteric transient amplifying cells: 2,237 nCPM
- epididymal efferent duct absorptive cells: 2,218 nCPM
Immune cell
- total PBMC: 1,001 nTPM
- memory B-cell: 686 nTPM
- myeloid DC: 671 nTPM
- naive CD4 T-cell: 651 nTPM
- memory CD4 T-cell: 623 nTPM
- plasmacytoid DC: 622 nTPM
Brain region
- choroid plexus: 312 nTPM
- hypothalamus: 294 nTPM
- thalamus: 248 nTPM
- cerebellum: 232 nTPM
- medulla oblongata: 232 nTPM
- midbrain: 230 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.14
- gnomAD pLI
- 0.56
- gnomAD missense Z
- 0.33
- DepMap mean gene effect
- -0.47
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- cellular respiration
- generation of precursor metabolites and energy
- mitochondrial electron transport, cytochrome c to oxygen
Cellular components
Protein domainsUniProt · Pfam · InterPro
- Cytochrome c oxidase subunit VIIc
- Cytochrome c oxidase subunit VIIc superfamily
- Cytochrome c oxidase subunit VIIc
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of COX7C in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads COX7C as an antibody target. Whether an autoantibody or antibody against COX7C could matter depends on whether native COX7C is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
COX7C is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label COX7C as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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