CCR8
C-C chemokine receptor type 8
Also known as: CCR8_HUMAN, CDw198, CKR-L1, CMKBR8, CMKBRL2, CY6, GPR-CY6, TER1
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P51685
- Gene
- CCR8
- Ensembl
- ENSG00000179934
- Chromosome
- 3
- Canonical length
- 355 aa
- Protein class
- CD markers, G-protein coupled receptors, Predicted intracellular proteins, Predicted membrane proteins
OverviewNCBI Gene
This gene encodes a member of the beta chemokine receptor family, which is predicted to be a seven transmembrane protein similar to G protein-coupled receptors. Chemokines and their receptors are important for the migration of various cell types into the inflammatory sites. This receptor protein preferentially expresses in the thymus. I-309, thymus activation-regulated cytokine (TARC) and macrophage inflammatory protein-1 beta (MIP-1 beta) have been identified as ligands of this receptor. Studies of this receptor and its ligands suggested its role in regulation of monocyte chemotaxis and thymic cell apoptosis. More specifically, this receptor may contribute to the proper positioning of activated T cells within the antigenic challenge sites and specialized areas of lymphoid tissues. This gene is located at the chemokine receptor gene cluster region. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
355 residues, UniProt reviewed canonical sequence.
>P51685|CCR8
1 MDYTLDLSVT TVTDYYYPDI FSSPCDAELI QTNGKLLLAV FYCLLFVFSL LGNSLVILVL
61 VVCKKLRSIT DVYLLNLALS DLLFVFSFPF QTYYLLDQWV FGTVMCKVVS GFYYIGFYSS
121 MFFITLMSVD RYLAVVHAVY ALKVRTIRMG TTLCLAVWLT AIMATIPLLV FYQVASEDGV
181 LQCYSFYNQQ TLKWKIFTNF KMNILGLLIP FTIFMFCYIK ILHQLKRCQN HNKTKAIRLV
241 LIVVIASLLF WVPFNVVLFL TSLHSMHILD GCSISQQLTY ATHVTEIISF THCCVNPVIY
301 AFVGEKFKKH LSEIFQKSCS QIFNYLGRQM PRESCEKSSS CQQHSSRSSS VDYILLocalizationUniProt · AlphaFold · HPA
Whether an antibody against CCR8 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Cell surface
- Secreted
- No
- Transmembrane segments
- 7
- Mean surface accessibility (rSASA)
- 0.34
- Highest tissue expression
- 7.2 nTPM
Expression across tissuesHPA
Tissue
- thymus: 7.2 nTPM
- urinary bladder: 1.2 nTPM
- appendix: 0.9 nTPM
- gallbladder: 0.6 nTPM
- lymph node: 0.6 nTPM
- tonsil: 0.6 nTPM
Single-cell type
- cone photoreceptor cells: 4.1 nCPM
- t-cells: 3.2 nCPM
- epicardial cells: 2.3 nCPM
- suprabasal keratinocytes: 0.5 nCPM
- foveolar cells: 0.4 nCPM
- innate lymphoid cells: 0.4 nCPM
Immune cell
- T-reg: 26 nTPM
- memory CD4 T-cell: 4.6 nTPM
- memory CD8 T-cell: 2 nTPM
- NK-cell: 0.8 nTPM
- total PBMC: 0.8 nTPM
- naive CD4 T-cell: 0.3 nTPM
Brain region
- choroid plexus: 0.3 nTPM
- medulla oblongata: 0.3 nTPM
- basal ganglia: 0.2 nTPM
- cerebral cortex: 0.2 nTPM
- hippocampal formation: 0.2 nTPM
- hypothalamus: 0.2 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.34
- gnomAD pLI
- 0.01
- gnomAD missense Z
- 0.24
- DepMap mean gene effect
- 0.03
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- calcium-mediated signaling
- cell adhesion
- cell chemotaxis
- chemotaxis
- G protein-coupled receptor signaling pathway
- immune response
- positive regulation of cytosolic calcium ion concentration
Molecular functions
- C-C chemokine binding
- C-C chemokine receptor activity
- chemokine receptor activity
- coreceptor activity
- G protein-coupled receptor activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of CCR8 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads CCR8 as an antibody target. Whether an autoantibody or antibody against CCR8 could matter depends on whether native CCR8 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
CCR8 is annotated at the cell surface, where native CCR8 is exposed to circulating antibodies and is a prime autoantibody target that could block, deplete, or overstimulate it.
Annotation status
The present source text does not explicitly label CCR8 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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