Seroatlas · Human Serome Atlas

ATOX1

Copper transport protein ATOX1

Also known as: ATOX1_HUMAN, HAH1

Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene

Protein identityUniProt · HPA

UniProt accession
O00244
Gene
ATOX1
Ensembl
ENSG00000177556
Chromosome
5
Canonical length
68 aa
Protein class
Predicted intracellular proteins
Subcellular location
Nucleoplasm,Plasma membrane
Quaternary structure
Homodimer

OverviewNCBI Gene

This gene encodes a copper chaperone that plays a role in copper homeostasis by binding and transporting cytosolic copper to ATPase proteins in the trans-Golgi network for later incorporation to the ceruloplasmin. This protein also functions as an antioxidant against superoxide and hydrogen peroxide, and therefore, may play a significant role in cancer carcinogenesis. Because of its cytogenetic location, this gene represents a candidate gene for 5q-syndrome. [provided by RefSeq, Jul 2008]

Canonical amino-acid sequenceUniProt

68 residues, UniProt reviewed canonical sequence.

>O00244|ATOX1
     1  MPKHEFSVDM TCGGCAEAVS RVLNKLGGVK YDIDLPNKKV CIESEHSMDT LLATLKKTGK
    61  TVSYLGLE

LocalizationUniProt · AlphaFold · HPA

Whether an antibody against ATOX1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.

Antibody reachability
Intracellular
Secreted
No
Transmembrane segments
0
Mean surface accessibility (rSASA)
0.31
Highest tissue expression
407 nTPM

Expression across tissuesHPA

Tissue

  • choroid plexus: 407 nTPM
  • liver: 273 nTPM
  • kidney: 227 nTPM
  • midbrain: 226 nTPM
  • spinal cord: 194 nTPM
  • hypothalamus: 177 nTPM

Single-cell type

  • hepatocytes: 1,057 nCPM
  • hofbauer cells: 985 nCPM
  • enterocytes: 684 nCPM
  • esophageal apical cells: 617 nCPM
  • late spermatids: 506 nCPM
  • esophageal suprabasal cells: 444 nCPM

Immune cell

  • intermediate monocyte: 249 nTPM
  • plasmacytoid DC: 219 nTPM
  • classical monocyte: 209 nTPM
  • eosinophil: 200 nTPM
  • non-classical monocyte: 178 nTPM
  • myeloid DC: 172 nTPM

Brain region

  • white matter: 115 nTPM
  • hypothalamus: 115 nTPM
  • thalamus: 107 nTPM
  • pons: 103 nTPM
  • spinal cord: 103 nTPM
  • midbrain: 98 nTPM

Genetic constraint and essentialitygnomAD · DepMap

Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.

gnomAD LOEUF (loss-of-function intolerance)
1.07
gnomAD pLI
0.59
gnomAD missense Z
-0.06
DepMap mean gene effect
0.05
DepMap dependency class
selective

Cancer expressionTCGA

Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).

OntologyGO

Biological processes

Molecular functions

Cellular components

Protein domainsUniProt · Pfam · InterPro

KeywordsUniProt

InteractionsUniProt · HPA

Protein binding partners of ATOX1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.

Antibody and autoantibody relevanceSeroatlas analysis

Seroatlas reads ATOX1 as an antibody target. Whether an autoantibody or antibody against ATOX1 could matter depends on whether native ATOX1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.

ATOX1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.

Annotation status

The present source text does not explicitly label ATOX1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.

Canonical record: https://seroatlas.com/gene/ATOX1. Study-independent annotations aggregated from UniProt, Human Protein Atlas, PubMed, IEDB, Pfam, InterPro, Gene Ontology, AlphaFold, gnomAD, DepMap, ClinVar, TCGA. Catalog release seroatlas-reviewed-human-uniprot-20260313.

Seroatlas is the reference for exploring autoantibody and antibody serology at the human-protein level: the autoreactome and human serome, multiplex serology (HuProt, HuScan, VirScan, PhIP-Seq).

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