ATOX1
Copper transport protein ATOX1
Also known as: ATOX1_HUMAN, HAH1
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- O00244
- Gene
- ATOX1
- Ensembl
- ENSG00000177556
- Chromosome
- 5
- Canonical length
- 68 aa
- Protein class
- Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Plasma membrane
- Quaternary structure
- Homodimer
OverviewNCBI Gene
This gene encodes a copper chaperone that plays a role in copper homeostasis by binding and transporting cytosolic copper to ATPase proteins in the trans-Golgi network for later incorporation to the ceruloplasmin. This protein also functions as an antioxidant against superoxide and hydrogen peroxide, and therefore, may play a significant role in cancer carcinogenesis. Because of its cytogenetic location, this gene represents a candidate gene for 5q-syndrome. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
68 residues, UniProt reviewed canonical sequence.
>O00244|ATOX1
1 MPKHEFSVDM TCGGCAEAVS RVLNKLGGVK YDIDLPNKKV CIESEHSMDT LLATLKKTGK
61 TVSYLGLELocalizationUniProt · AlphaFold · HPA
Whether an antibody against ATOX1 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.31
- Highest tissue expression
- 407 nTPM
Expression across tissuesHPA
Tissue
- choroid plexus: 407 nTPM
- liver: 273 nTPM
- kidney: 227 nTPM
- midbrain: 226 nTPM
- spinal cord: 194 nTPM
- hypothalamus: 177 nTPM
Single-cell type
- hepatocytes: 1,057 nCPM
- hofbauer cells: 985 nCPM
- enterocytes: 684 nCPM
- esophageal apical cells: 617 nCPM
- late spermatids: 506 nCPM
- esophageal suprabasal cells: 444 nCPM
Immune cell
- intermediate monocyte: 249 nTPM
- plasmacytoid DC: 219 nTPM
- classical monocyte: 209 nTPM
- eosinophil: 200 nTPM
- non-classical monocyte: 178 nTPM
- myeloid DC: 172 nTPM
Brain region
- white matter: 115 nTPM
- hypothalamus: 115 nTPM
- thalamus: 107 nTPM
- pons: 103 nTPM
- spinal cord: 103 nTPM
- midbrain: 98 nTPM
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.07
- gnomAD pLI
- 0.59
- gnomAD missense Z
- -0.06
- DepMap mean gene effect
- 0.05
- DepMap dependency class
- selective
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 4% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- copper ion export
- copper ion transport
- intracellular copper ion homeostasis
- negative regulation of apoptotic process
- response to oxidative stress
Molecular functions
- ATPase binding
- copper chaperone activity
- copper ion binding
- copper-dependent protein binding
- cuprous ion binding
- metallochaperone activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
InteractionsUniProt · HPA
Protein binding partners of ATOX1 in the human serome: UniProt-annotated complex subunits plus reported interactors. Each links to its own Seroatlas record.
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads ATOX1 as an antibody target. Whether an autoantibody or antibody against ATOX1 could matter depends on whether native ATOX1 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
ATOX1 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label ATOX1 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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