AKR1C4
Aldo-keto reductase family 1 member C4
Also known as: 3-alpha-HSD, AK1C4_HUMAN, C11, CDR, CHDR, DD4, HAKRA, MGC22581
Cross-references: UniProt · Ensembl · Human Protein Atlas · GeneCards · NCBI Gene
Protein identityUniProt · HPA
- UniProt accession
- P17516
- Gene
- AKR1C4
- Ensembl
- ENSG00000198610
- Chromosome
- 10
- Canonical length
- 323 aa
- Protein class
- Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Plasma proteins, Potential drug targets, Predicted intracellular proteins
- Subcellular location
- Nucleoplasm,Nucleoli fibrillar center,Endoplasmic reticulum,Cytosol
OverviewNCBI Gene
This gene encodes a member of the aldo/keto reductase superfamily, which consists of more than 40 known enzymes and proteins. These enzymes catalyze the conversion of aldehydes and ketones to their corresponding alcohols by utilizing NADH and/or NADPH as cofactors. The enzymes display overlapping but distinct substrate specificity. This enzyme catalyzes the bioreduction of chlordecone, a toxic organochlorine pesticide, to chlordecone alcohol in liver. This gene shares high sequence identity with three other gene members and is clustered with those three genes at chromosome 10p15-p14. [provided by RefSeq, Jul 2008]
Canonical amino-acid sequenceUniProt
323 residues, UniProt reviewed canonical sequence.
>P17516|AKR1C4
1 MDPKYQRVEL NDGHFMPVLG FGTYAPPEVP RNRAVEVTKL AIEAGFRHID SAYLYNNEEQ
61 VGLAIRSKIA DGSVKREDIF YTSKLWCTFF QPQMVQPALE SSLKKLQLDY VDLYLLHFPM
121 ALKPGETPLP KDENGKVIFD TVDLSATWEV MEKCKDAGLA KSIGVSNFNC RQLEMILNKP
181 GLKYKPVCNQ VECHPYLNQS KLLDFCKSKD IVLVAHSALG TQRHKLWVDP NSPVLLEDPV
241 LCALAKKHKQ TPALIALRYQ LQRGVVVLAK SYNEQRIREN IQVFEFQLTS EDMKVLDGLN
301 RNYRYVVMDF LMDHPDYPFS DEYLocalizationUniProt · AlphaFold · HPA
Whether an antibody against AKR1C4 can act on the native protein depends on physical access: surface and secreted proteins are reachable by circulating antibodies, intracellular proteins usually are not.
- Antibody reachability
- Intracellular
- Secreted
- No
- Transmembrane segments
- 0
- Mean surface accessibility (rSASA)
- 0.22
- Highest tissue expression
- 670 nTPM
Expression across tissuesHPA
Tissue
- liver: 670 nTPM
- gallbladder: 39 nTPM
- duodenum: 2.3 nTPM
- small intestine: 1.1 nTPM
- stomach: 1.1 nTPM
- testis: 0.7 nTPM
Single-cell type
- hepatocytes: 808 nCPM
- cholangiocytes: 29 nCPM
- kupffer cells: 9.2 nCPM
- late primary spermatocytes: 7.4 nCPM
- early spermatids: 6.2 nCPM
- epicardial cells: 4.5 nCPM
Immune cell
- basophil: 0.1 nTPM
- gdT-cell: 0.1 nTPM
- classical monocyte: 0 nTPM
- eosinophil: 0 nTPM
- intermediate monocyte: 0 nTPM
- MAIT T-cell: 0 nTPM
Brain region
- choroid plexus: 0.4 nTPM
- medulla oblongata: 0.3 nTPM
- midbrain: 0.3 nTPM
- pons: 0.2 nTPM
- thalamus: 0.2 nTPM
- white matter: 0.2 nTPM
DiseaseUniProt · ClinVar · IEDB · PubMed
Four sources answering four different questions about AKR1C4.
Disease | AllUniProt
Conditions AKR1C4 is implicated in, by any mechanism.
- 46,XY sex reversal 8 (SRXY8) MIM:614279
Genetic constraint and essentialitygnomAD · DepMap
Does the body need this protein intact? Low LOEUF or a strong DepMap dependency means loss or blockade of the protein is likely to be felt.
- gnomAD LOEUF (loss-of-function intolerance)
- 1.72
- gnomAD pLI
- 0
- gnomAD missense Z
- -1.04
- DepMap mean gene effect
- 0.1
- DepMap dependency class
- none
Cancer expressionTCGA
Across TCGA tumor cohorts, this protein is over-expressed in roughly 2% of surveyed tumor types (aggregate summary; per-cohort expression, alteration, and survival load in the interactive view).
OntologyGO
Biological processes
- androgen metabolic process
- bile acid and bile salt transport
- bile acid biosynthetic process
- cellular response to jasmonic acid stimulus
- daunorubicin metabolic process
- doxorubicin metabolic process
- progesterone metabolic process
- prostaglandin metabolic process
- retinoid metabolic process
- steroid metabolic process
Molecular functions
- 3-alpha-hydroxysteroid 3-dehydrogenase [NAD(P)+] activity
- 5-alpha-androstane-3-beta,17-beta-diol dehydrogenase (NADP+) activity
- alcohol dehydrogenase (NADP+) activity
- aldose reductase (NADPH) activity
- androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity
- androsterone dehydrogenase [NAD(P)+] activity
- bile acid binding
- bile acid transmembrane transporter activity
- electron transfer activity
- estradiol 17-beta-dehydrogenase [NAD(P)+] activity
- ketosteroid monooxygenase activity
- oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
- retinal dehydrogenase (NAD+) activity
- testosterone dehydrogenase (NAD+) activity
- testosterone dehydrogenase (NADP+) activity
- chlordecone reductase activity
Cellular components
Protein domainsUniProt · Pfam · InterPro
KeywordsUniProt
Antibody and autoantibody relevanceSeroatlas analysis
Seroatlas reads AKR1C4 as an antibody target. Whether an autoantibody or antibody against AKR1C4 could matter depends on whether native AKR1C4 is physically reachable, whether the body needs it intact, and whether it acts in a disease-relevant tissue.
AKR1C4 is annotated as predominantly intracellular. Intracellular proteins are common autoantibody markers, becoming visible to the immune system after cell injury or altered processing, but are usually markers of disease rather than direct drivers.
Annotation status
The present source text does not explicitly label AKR1C4 as an autoantigen. Seroatlas presents hypothesis context only and does not manufacture a known-serology claim.
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